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Publications

2021

  1. Панина И.С., Мамчур А.А., Ярошевич И.А., Зленко Д.В., Пичкур Е.Б., Кудрявцева С.С., Муронец В.И., Соколова О.С., Станишнева-Коновалова Т.Б. Изучение конформационной подвижности GroEL методами криоэлектронной микроскопии и молекулярной динамики. Кристаллография
  2. Качер Ю.Г., Карлова М.Г., Глухов Г.С., Чжан Х., Заклязьминская Е.В., Лоусcарн Ж., Соколова О.С. Комплексный подход к изучению структуры и функций сердечных потенциалзависимых ионных каналов. Кристаллография
  3. Пичкур Е.Б., Микиртумов В.И., Тихонова О.В., Деркачева Н.И., Курочкина Л.П., Соколова О.С. Определение околоатомной структуры олигомерных белков E. coli без предварительной очистки. Кристаллография

2020

  1. Garabedian Mikael V., Alison Wirshing, Anna Vakhrusheva, Bengi Turegun, Sokolova Olga S., Goode Bruce L. A septin-Hof1 scaffold at the yeast bud neck binds and organizes actin cables. Molecular Biology of the Cell
  2. Mikirtumov Vasily, Pichkur Evgeny, Tikhonova Olga, Kurochkina Lidia, Sokolova Olga. Cryo-EM Analysis and de Novo Modeling of E. Coli dihydrolipoamide Succinyltransferase Catalytic Domain Structure. Microscopy and Microanalysis, с. 1-4
  3. Pichkur Evgeny, Kudryavtseva Sofia, Sokolova Olga, Stanishneva-Konovalova Tatiana. Cryo-EM Structure of GroEL in Complex with the Prion Protein. Microscopy and Microanalysis, с. 1-4
  4. Sokolova Olga, Pichkur Evgeny, Kurochkina Lidia. Cryo-EM Structure of the Novel Viral Chaperonin, Encoded by Gene 228 of Bacteriophage AR9 Bacillus Subtilis. Microscopy and Microanalysis, с. 1-3
  5. Stanishneva-Konovalova Tatiana B., Semenyuk Pavel I., Kurochkina Lidia P., Pichkur Evgeny B., Vasilyev Alexander L., Kovalchuk Mikhail V., Kirpichnikov Mikhail P., Sokolova Olga S. Cryo-EM reveals an asymmetry in a novel single-ring viral chaperonin. Journal of Structural Biology, том 209, № 2, с. 107439Full-text PDFEnglish
  6. Danilova Yana, Yakunina Maria, Moiseenko Andrey, Belousova Victoria, Vishnyakov Innokentiy, Sokolova Olga. Electron Tomography Revealed Compact DNA in the Nucleus-like Compartment, Formed in the Bacterial Cell During Infection by the phiKZ Bacteriophage. Microscopy and Microanalysis, с. 1-4
  7. Colbasevici Alexandr, Voskoboynikova Natalia, Orekhov Philipp S., Bozdaganyan Marine E., Karlova Maria G., Sokolova Olga S., Klare Johann P., Mulkidjanian Armen Y., Shaitan Konstantin V., Steinhoff Heinz-Jürgen. Lipid dynamics in nanoparticles formed by maleic acid-containing copolymers: EPR spectroscopy and molecular dynamics simulations. Biochimica et Biophysica Acta - Biomembranes, с. 183207Full-text PDFEnglish
  8. Danilova Yana A., Belousova Viktoriia V., Moiseenko Andrey V., Vishnyakov Innokentii E., Yakunina Maria V., Sokolova Olga S. Maturation of Pseudo-Nucleus Compartment in P. aeruginosa, Infected with Giant phiKZ Phage. Viruses, том 12, № 10, с. 1197
  9. Natalia Loiko, Yana Danilova, Andrey Moiseenko, Vladislav Kovalenko, Ksenia Tereshkina, El-Registan Galina I., Sokolova Olga S., Krupyanskii Yurii F. Morphological peculiarities of DNA-protein complexes in dormant Escherichia coli cells, subjected to prolonged starvation Condensation of DNA in dormant cells of Escherichia coli. bioRxiv.
  10. Loiko Natalia, Danilova Yana, Moiseenko Andrey, Kovalenko Vladislav, Tereshkina Ksenia, Tutukina Maria, El-Registan Galina I., Sokolova Olga S., Krupyanskii Yurii F. Morphological peculiarities of DNA-protein complexes in starved Escherichia coli cells. PLoS ONE, том 15, № 10, с. e0231562
  11. Popova A.V., Shneider M.M., Arbatsky N.P., Kasimova A.A., Senchenkova S.N., Shashkov A.S., Dmitrenok A.S., Chizhov A.O., Mikhailova Y.V., Shagin D.A., Sokolova O.S., Timoshina O.Y., Kozlov R.S., Miroshnikov K.A., Knirel Y.A. Specific Interaction of Novel Friunavirus Phages Encoding Tailspike Depolymerases with Corresponding Acinetobacter baumannii Capsular Types. Journal of Virology.
  12. Vakhrusheva Anna, Gourinath Samudrala, Sokolova Olga. Structural Investigation of the Complex of Actin with Filamin from Entamoeba Histolytica. Microscopy and Microanalysis, с. 1-2.
  13. Semenyuk Pavel I., Moiseenko Andrey V., Sokolova Olga S., Muronetz Vladimir I., Kurochkina Lidia P. Structural and functional diversity of novel and known bacteriophage-encoded chaperonins. International Journal of Biological Macromolecules, том 157, с. 544-552.
  14. Kacher Julia, Gluhov Grigory, Abramochkin Denis, Sokolova Olga. The Cytoplasmic Domain of Voltage-dependent Potassium Channels of the Eag Family May Play a Role in the Regulation of Ion Transport. Microscopy and Microanalysis, с. 1-2.
  15. Volokh O.I., Armeev G.A., Trifonova E.S., Sokolova O.S. Investigation of the Effect of a Single-Stranded Break on the Mechanical Parameters of DNA by Molecular Dynamics Method. Moscow University Biological Sciences Bulletin, том 75, № 3, с. 136-141.

    Волох О.И., Армеев Г.А., Трифонова Е.С., Соколова О.С. Исследование влияния однонитевого разрыва на механические параметры ДНК методом молекулярной динамики. Вестник Московского университета. Серия 16: Биология, том 75, № 3, с. 164-169.

2019

  1. Stanishneva-Konovalova T.B., Pichkur E.B., Semenyuk P.I., Kurochkina L.P., Sokolova O.S. ATP-bound Conformation of OBP Chaperonin. Microscopy and Microanalysis, 2019, том 25, № S2, с. 1334-1335Full-text PDFEnglish
  2. Moiseenko A.V., Loiko N.G., Chertkov O.V., Feofanov A.V., Krupyanskii Yu F., Sokolova O.S. Analysis of Element Composition of DNA-Protein Crystals In Vitro. Moscow University Biological Sciences Bulletin, 2019, том 74, № 4, с. 240-245

    Моисеенко А.В., Лойко Н.Г., Чертков О.В., Феофанов А.В., Крупянский Ю.Ф., Соколова О.С. АНАЛИЗ ЭЛЕМЕНТНОГО СОСТАВА ДНК-БЕЛКОВЫХ КРИСТАЛЛОВ IN VITRO. Вестник Московского университета. Серия 16: Биология, 2019, том 74, № 4, с. 301-307

  3. Kravchuk Oksana I., Lyupina Yulia V., Erokhov Pavel A., Finoshin Alexander D., Adameyko Kim I., Mishyna Maryia Yu, Moiseenko Andrey V., Sokolova Olga S., Orlova Olga V., Beljelarskaya Svetlana N., Serebryakova Marina V., Indeykina Maria I., Bugrova Anna E., Kononikhin Alexey S., Mikhailov Victor S. Characterization of the 20S proteasome of the lepidopteran, Spodoptera frugiperda. Biochimica et Biophysica Acta - Proteins and Proteomics, 2019Full-text PDFEnglish
  4. Krupyanskii Yurii, Loiko Natalia, Moiseenko Andrey, Tereshkina Kseniya, Sokolova Olga. Condensation of Nucleoid in Bacteria as a Result of Starvation. International Journal of Biomedicine, 2019, том 9, № S19, с. 8
  5. Loiko N.G., Danilova Ya A., Moiseenko A.V., Demkina E.V., Kovalenko V.V., Tereshkina K.B., El-Registan G.I., Sokolova O.S., Krupyanskii Yu F. Condensation of nucleoid in Escherichia coli cell as a result of prolonged starvation. ArXiV Quantitative Biology, 2019, том 1901, с. 11322
  6. Stanishneva-Konovalova Tatiana B., Semenyuk Pavel I., Pichkur Evgeny B., Kurochkina Lidia P., Sokolova Olga S. Conformations of a Viral Chaperonin in Different Nucleotide-Bound States. International Journal of Biomedicine, 2019, том 9, № S19, с. 10
  7. Stanishneva-Konovalova Tatiana B., Semenyuk Pavel I., Kurochkina Lidia P., Pichkur Evgeny B., Vasilyev Alexander L., Kovalchuk Mikhail V., Kirpichnikov Mikhail P., Sokolova Olga S. Cryo-EM reveals an asymmetry in a novel single-ring viral chaperonin. Journal of Structural Biology, 2019
  8. Tsarev Andrey V., Kamyshinskii Roman A., Mikirtumov Vasiliy I., Kulbatskii Dmitriy S., Yablokov Eugene O., Shenkarev Zakhar O., Sokolova Olga S., Lyukmanova Ekaterina N. Cryoelectron microscopy study of water-soluble extracellular domain of α7 nicotinic acetylcholine receptor. International Journal of Biomedicine, 2019, том 9, № S19, с. 20
  9. Sokolova O.S., Moiseenko A.V., Loiko N., Danilova Ya, Tereshkina K., Malyuchenko N.V., Feofanov A.V., Krupyansky Yu F., Studitsky V.M. DNA-PROTEIN IN-TERACTIONS – NEW OPPORTUNITIES FOR STRUCTURAL RESEARCH. Acta Naturae спецвыпуск, 2019, том 2, № S, с. 8
  10. Karlova M.G., Voskoboynikova N., Gluhov G.S., Abramochkin D., Malak O.A., Mulkidzhanyan A., Loussouarn⁠ G., Steinhoff H.J., Shaitan K.V., Sokolova O.S. Detergent-free solubilization of human Kv channels expressed in mammalian cells. Chemistry and Physics of Lipids, 2019, том 219, с. 50-57
  11. Stanishneva-Konovalova T.B., Sokolova O.S. Effects of pi(4,5)p2 concentration on the f-bar domain membrane binding as revealed by coarse-grained simulations. Proteins: Structure, Function and Bioinformatics, 2019Full-text PDFEnglish
  12. Karlova M.G., Valieva M.E., Danilova Ya, Kozlova A.L., Studitsky V.M., Sokolova O.S. Electron Microscopy of Yeast FACT Protein Complex. Microscopy and Microanalysis, 2019, том 25, № S2, с. 1336-1337Full-text PDFEnglish
  13. Vakhrusheva AV, Stanishneva-Konovalova TB, Sokolova OS. Interconnection of Actin-binding Proteins and Septins in Asymmetric Cell Division. Microscopy and Microanalysis, 2019, том 25, № 2, с. 1340-1341
  14. Julia Kacher, Grigory Glukhov, Olga Sokolova. Nanoparticles with ion channels: solubilization and purification of membrane proteins. International Journal of Biomedicine, 2019, том 9, № S19, с. 18
  15. Andrey Moiseenko, Natalia Loiko, Ksenia Tereshkina, Yana Danilova, Vladislav Kovalenko, Oleg Chertkov, Feofanov Alexey V., Krupyanskii Yurii F., Sokolova Olga S. Projection structures reveal the position of the DNA within DNA-Dps Co-crystals. Biochemical and Biophysical Research Communications, 2019, том 517, № 3, с. 463-469
  16. Voskoboynikova Natalia, Karlova Maria, Kurre Rainer, Heinisch Juergen, Steinhoff Heinz-Juergen, Shaitan Konstantin V., Sokolova Olga S. SMA-based Extraction of the Yeast Cell Wall Integrity Sensor Mid2 from Native Membranes of Saccharomyces cerevisiae – Electron Microscopy Study. Microscopy and Microanalysis, 2019, том 25, № S2, с. 1338-1339Full-text PDFEnglish
  17. Andrey Moiseenko, Natalia Loiko, Ksenia Tereshkina, Yana Danilova, Oleg Chertkov, Feofanov Alexey V., Yurii Krupyanskii, Sokolova Olga S. Structural studies of DNA-Dps co-crystals formation. International Journal of Biomedicine, 2019, том 9, № S19, с. 27
  18. Evgeny Pichkur, Valery Novoseletsky, Mikhail Shneider, Anton Sedov, Nina Sikilinda, Konstantin Miroshnikov, Olga Sokolova. Structure of Pseudomonas aeruginosa Luz-24-like phage U47. International Journal of Biomedicine, 2019, том 9, № S19, с. 30
  19. Vakhrusheva Anna V., Semenyuk Pavel I., Medvedeva Natalia V., Minin Alexander A., Sokolova Olga S. Study of vimentin unit-length filaments aggregation in presence of different polymers. International Journal of Biomedicine, 2019, том 9, № S19, с. 28
  20. Vakhrusheva Anna, Endzhievskaya Sofia, Zhuikov Vsevolod, Nekrasova Tatyana, Parshina Evgenia, Ovsiannikova Natalia, Popov Vladimir Viktorovich, Bagrov Dmitry, Minin Alexander A., Sokolova Olga S. The Role of Vimentin in Directional Migration of Rat Fibroblasts. Cytoskeleton, 2019
  21. Chertkov Oleg V., Karlova Maria G., Studitsky Vasily M., Sokolova Olga S. The Three-Dimensional Structure of (+39) RNA-Polymerase Elongation Complex Determined by Cryo-Electron Microscopy, Microscopy and Microanalysis, 2019, том 25, № S2, с. 1332-1333Full-text PDFEnglish
  22. Chemeris Angelina, Gautreau Alexis M., Sokolova Olga S. Three-Dimensional Reconstruction of Full-Length Tankyrase 1. Microscopy and Microanalysis, 2019, том 25, № S2, с. 1330-1331Full-text PDFEnglish
  23. Sokolova Olga S., Tatiana Stanishneva-Konovalova, Wang Xi, Olga Shaburova, Kurochkina Lidia P. Viral chaperonins – new and intriguing group. International Journal of Biomedicine, 2019, том 9, № S19, с. 32
  24. Malak Olfat A., Gluhov Grigory S., Anastasia Grizel, Kseniya Kudryashova, Sokolova Olga S., Gildas Loussouarn. Voltage-dependent activation in EAG channels follows a ligand-receptor rather than a mechanical-lever mechanism. Journal of Biological Chemistry, 2019, том 294, № 16, с. 6506-6521Full-text PDFEnglish

2018

  1. Guo S., Sokolova O., Chung J., Padrick S., Gelles J., Goode B. Abp1 promotes Arp2/3 complex-dependent actin nucleation and stabilizes branch junctions by antagonizing GMF. Nature communications, 2018, том 9, № 1, с. 2895. Full-text PDFEnglish
  2. Popinako A., Antonov M., Dibrova D., Chemeris A., Sokolova O.S. Analysis of the interactions between GMF and Arp2/3 complex in two binding sites by molecular dynamics simulation. Biochemical and Biophysical Research Communications, 2018, том 496, № 2, с. 529-535. Full-text PDFEnglish
  3. Krupyanskii Y.F., Loiko N.G., Sinitsyn D.O., Tereshkina K.B., Tereshkin E.V., Frolov I.A., Chulichkov A.L., Bokareva D.A., Mysyakina I.S., Nikolaev Y.A., El’-Registan G.I., Popov V.O., Sokolova O.S., Shaitan K.V., Popov A.N. Biocrystallization in Bacterial and Fungal Cells and Spores. Crystallography Reports, 2018, том 63, № 4, с. 594-599
  4. Stanishneva-Konovalova T.B., Semenyuk P.I., Pechnikova E., Kurochkina L.P., Sokolova O.S. Cryo-EM Structure of the Single-Ring Chaperonin from Bacteriophage OBP P. fluorescence. Microscopy and Microanalysis, 2018, том 24, № S1, с. 1244-1245
  5. Krupyanskiy Y., Loyko N., Tereshkina K., Kovalenko V., Tereshkin E., Sokolova O., Popov A. In cellulo nanocrystallization of the nucleoid in bacteria and spores. FEBS Open Bio Supplement S1, 2018, том 8, с. 147-148
  6. Garabedian M., Stanishneva-Konovalova T., Lou C., Rands T., Pollard L., Sokolova O., Goode B. Integrated control of formin-mediated actin assembly by a stationary inhibitor and mobile activator. Journal of Cell Biology, 2018, том 217, № 10 Full-text PDFEnglish
  7. Valieva M., Chertkov O., Karlova M., Kirpichnikov M.P., Feofanov A.V., Sokolova O.S., Studitsky V. Multiple Conformations of Compact Dinucleosomes: Analysis by Electron Microscopy. Microscopy and Microanalysis, 2018, том 24, № S1, с. 1242-1243
  8. Krupyanskii Yu F., Loiko N.G., Kovalenko V.V., Tereshkina K.B., Sokolova O.S., Popov A.N. Nanocrystallization of bacteria nucleoid at stress conditions. Journal of Bioenergetics and Biomembranes, 2018
  9. Krupyanskii Y., Loyko N., Tereshkina K., Kovalenko V., Tereshkin E., Sokolova O.S., Popov A. Nanocrystallization of the Nucleoid of Bacteria under Stress. Acta Crystallographica Section A: Foundations and Advances, 2018, том 74, с. e203-e204
  10. Moiseenko A., Tereshkina K., Loiko N., Danilova Y., Krupyansky Y., Sokolova O.S. Projection Structures of DNA-Dps Co-crystals are Determined by the Length of the Incorporated DNA. Microscopy and Microanalysis, 2018, том 24, № S1, с. 1240-1241
  11. Vakhrusheva A., Zhuikov V., Endzhievskaya S., Minin A.A., Sokolova O.S. The ASM Study of Elastic Properties of Rat Fibroblasts, Lacking Vimentin. Microscopy and Microanalysis, 2018, том 24, № S1, с. 1238-1239
  12. Chertkov O.V., Karlova M.G., Gerasimova N.S., Sokolova O.S. Purification of RNA Polymerase Elongation Complexes for Cryoelectron Microscopy Investigation. Moscow University Biological Sciences Bulletin, 2018, том 73, № 3, с. 142-145 (ENG), Серия 16: Биология, 2018, том 73, № 3, с. 173-177 (RUS)
  13. Shenkarev Z.O., Karlova M.G., Kulbatskii D.S., Kirpichnikov M.P., Lyukmanova E.N., Sokolova O.S. Recombinant Production, Reconstruction in Lipid–Protein Nanodiscs, and Electron Microscopy of Full-Length Alpha-Subunit of Human Potassium Channel Kv7.1. Biochemistry (Moscow), 2018, том 83, № 5, с. 562-573 (ENG), Биохимия, 2018, том 83, № 5, с. 735-748 (RUS)

  14. Chemeris A.S., Vakhrusheva A.V., Derkacheva N.I., Sokolova O.S. Regulation of the Actin Cytoskeleton Transformation in the Cell by ARP2/3 Complex. Review. Moscow University Biological Sciences Bulletin, 2018, том 73, № 1, с. 1-6 Full-text PDFRussian

2017

  1. Maslakova A.A., Rubtsov M.A., Efimova V.S., Sokolova O.S., Smirnova O.V., Orlovsky I.V. Alpha1-antitrypsin-derived C-terminal peptide is a potent oxidative stress inhibitor. Molecular Biology of the Cell (Suppl. Data), 2017, том 28, № 26, с. 3727-P1259. Full-text PDFEnglish
  2. Mishyna M., Volokh O., Danilova Ya, Gerasimova N., Pechnikova E., Sokolova O.S. Effects of radiation damage in studies of protein-dna complexes by cryo-em. Micron, 2017, том 96, с. 57-64 Full-text PDFEnglish
  3. Shcherbakova T.D., Tzetlin A.B., Mardashova M.V., Sokolova O.S. Fine structure of the tubes of Maldanidae (Annelida). Journal of the Marine Biological Association of the United Kingdom, 2017, том 97, № 5, с. 1177-1187
  4. Donchenko E.K., Pechnikova E.V., Mishyna M.Y., Manukhova T.I., Sokolova O.S., Nikitin N.A., Atabekov J.G., Karpova O.V. Structure and properties of virions and virus-like particles derived from the coat protein of Alternanthera mosaic virus. PLoS ONE, 2017, том 12, № 8, с. e0183824 Full-text PDFEnglish
  5. Popinako A.V., Antonov M.Yu, Chemeris A.S., Shaitan K.V., Sokolova O.S. Analysis of the Interactions between Arp2/3 Complex and an Inhibitor Arpin by Molecular Dynamics Simulation. Biophysics, 2017, том 62, № 6, с. 885-891. Full-text PDFEnglish, Биофизика, 2017, том 62, № 6, с. 1077-1083. Full-text PDFRussian
  6. Sinitsyn D.O., Loiko N.G., Gularyan S.K., Stepanov A.S., Tereshkina K.B., Chulichkov A.L., Nikolaev A.A., El-Registan G.I., Popov V.O., Sokolova O.S.,Shaitan K.V., Popov A.N., Krupyanskii Yu F. Biocrystallization of bacterial nucleoid under stress. Russian Journal of Physical Chemistry B, 2017, том 11, № 5, с. 833-838 (ENG), Химическая физика, 2017, том 36, № 9, с. 59-65 (RUS)
  7. Only in RussianNovoseletsky V. N., Volyntseva A. D., Shaitan K. V., Sokolova O. S. Molecular modeling of the spatial structure of the tetramerization domain of a human potassium channel kv10.2 in different states. Вестник Московского университета. Серия 16: Биология, 2017, № 2, с. 82-86. Full-text PDFRussian
  8. Only in RussianValieva M. E., Derkacheva N. I. Sokolova O. S. Purification of DNA-protein complexes by means of native gel electrophoresis for study under EM. Вестник Московского университета. Серия 16: Биология, 2017, том 72, № 1, с. 3-8. Full-text PDFRussian
  9. Only in RussianKarlova M., Volokh O. A., Chertkov, O. V., Kirpichnikov M. P., Studitskii V. M., Sokolova O. S. Purification and concentration RNA polymerase complexes with the use of an affinity monolayer. Биоорганическая химия, 2017, том 43, № 6, с. 637-643. Full-text PDFRussian
  10. Sokolova Olga S., Chemeris Angelina, Guo Siyang, Alioto Salvatore L., Gandhi Meghal, Padrick Shae, Pechnikova Evgeniya, David Violaine, Gautreau Alexis, Goode Bruce L. Structural basis of Arp2/3 complex inhibition by GMF, Coronin, and Arpin. Journal of Molecular Biology, 2017, v. 429(2), p. 237-248. Full-text PDFEnglish

2016

  1. Glukhov G.S., Popinako A.V., Grizel A.V., Shaitan K.V., Sokolova O.S. The Structure of a Human Voltage-Gated Potassium Kv10.2 Channel which Lacks a Cytoplasmic PAS Domain. Biophysics, 2016, v. 61(4), p. 591-595. Full-text PDF English Full-text PDFRussian
  2. Lyupina Yulia V., Zatsepina Olga G., Serebryakova Marina V., Erokhov Pavel A., Abaturova Svetlana B., Orlova Olga V., Kravchuk Oksana I., Beljelarskaya Svetlana N., Lavrov Andrey I., Sokolova Olga S., Mikhailov Victor S. Proteomics of the 26S proteasome in Spodoptera frugiperda cells infected with the nucleopolyhedrovirus, AcMNPV. Biochimica et Biophysica Acta - Proteins and Proteomics, 2016, v. 1864(6), p. 738-746. Full-text PDF
  3. Maslakova A.A., Sokolova O.S., Orlovsky I.V. Alpha1-antitrypsin-derived C-terminal peptide activity at subnanomolar to micromolar concentrations in human cell lines: a mitogen and a metabolism activator. Molecular Biology of the Cell, 2016 ASCB Annual Meeting Abstracts, v. 27(25), p. 3947-P1169. Full-text PDF
  4. Polevova Svetlana, Kramina Tatiana, Sokolova Olga S. A novel approach to evaluate ultrathin section distortion. Microscopy and analysis, 2016, v. 30(5), p. S8-S10. Full-text PDF
  5. Semenyuk PI, Orlov VN, Sokolova OS, Kurochkina LP. New GroEL-like chaperonin of bacteriophage OBP P. fluorescens suppresses thermal protein aggregation in an ATP-dependent manner. Biochemical Journal, 2016, v. 473(15), p. 2383-2393. Full-text PDF
  6. Only in RussianStanishneva-Konovalova T.B., Derkacheva N.I., Polevova S.V., Sokolova O.S. Role of BAR family proteins in the regulation of cell membrane growth. Acta Naturae, 2016, v. 8(4), p. 121-131. Full-text PDF
  7. Stanishneva-Konovalova Tatiana B., Kelley Charlotte F., Eskin T.L., Messelaar Emily M., Wasserman S.A., Sokolova Olga S., Rodal Avital A. Coordinated autoinhibition of F-BAR domain membrane binding and WASp activation by Nervous Wreck. Proc Natl Acad Sci USA, 2016, v. 113(38), p. E5552-61. Full-text PDF
  8. Volokh O.I., Derkacheva N.I., Studitskiy V.M., Sokolova O.S. Structural Studies of Chromatin Remodeling Factors. Molecular Biology, 2016, v. 50(6), p. 1-13. Full-text PDF English Full-text PDF Russian
  9. Volokh O.I., Hsieh F.K., Karlova M.G., Trifonova E.S., Studitsky V.M., Sokolova O.S. Study of RNA Polymerase Transcription Through Nucleosome Using the Cryo-Electron Microscopy Approach. Moscow University biological sciences bulletin, 2016, v. 71(1), p. 34-38. Full-text PDF

2015

  1. Antonenko Yuri N., Gluhov Grigory S., Firsov Alexander M., Pogozheva Irina D., Kovalchuk Sergey I., Pechnikova Evgeniya V., Kotova Elena A., Sokolova Olga S. Gramicidin A disassembles large conductive clusters of its lysine-substituted derivatives in lipid membranes. Physical Chemistry Chemical Physics, 2015, v. 17, p. 17461-17470. Full-text PDF
  2. Clare Daniel Kofi, Pechnikova Eugenia V., Skurat Eugene V., Makarov Valentin V., Sokolova Olga S., Solovyev Andrey G., and Orlova Elena V. Novel Inter-Subunit Contacts in Barley Stripe Mosaic Virus Revealed by Cryo-Electron Microscopy. Structure, 2015, v. 23, p. 1-12. Full-text PDF
  3. Efremov YM, Dokrunova AA, Efremenko AV, Kirpichnikov MP, Shaitan KV, Sokolova OS. Distinct impact of targeted actin cytoskeleton reorganization on mechanical properties of normal and malignant cells. Biochimica et Biophysica Acta - Molecular Cell Research, 2015, v. 1853(11), p. 3117-3125. Full-text PDF
  4. Gaykalova Daria A., Kulaeva Olga I., Olesya Volokh, Shaytan Alexey K., Fu-Kai Hsieh, Kirpichnikov Mikhail P., Sokolova Olga S., Studitsky Vasily M. Structural analysis of nucleosomal barrier to transcription. Proceedings of the National Academy of Sciences of the United States of America, 2015, v. 1129(43), p. E5787-E5795. Full-text PDF
  5. Only in RussianKazakova T.A., Karlova M.G., Sokolova O.S., Maximov G.V. The study of potassium channels in a neuron using a "quantum point-blocker" complex. Russian nanotechnology, 2015, v. 10(3-4), p. 110-114. Full-text PDF
  6. Kelley C.F., Messelaar E.M., Eskin T.L., Wang S., Song K., Vishnia K., Becalska A.N., Shupliakov O., Hagan M.F., Danino D., Sokolova O.S., Nicastro D., Rodal A. Membrane charge directs the outcome of F-BAR domain lipid binding and autoregulation. Cell reports, 2015, v. 13, p. 1-13. Full-text PDF
  7. Maslakova A.A., Telkov M.V., Orlovskiy I.V., Sokolova O.S. Comparative analysis of Serpina1 gene expression in tumor cell lines. Moscow University press, 2015, v. 16(3), p. 26-31. Full-text PDF English Full-text PDFRussian
  8. Only in RussianOrshanskiy I.A, Popinako A.V., Koromyslova A.D., Volokh O.I., Shaitan K.V., Sokolova O.S. Molecular dynamics of interactions of N- and C-terminal domains with autoinhibition and activation of mDia1 formin. Biophysica, 2015, v. 60(3), p. 451-456. Full-text PDF
  9. Only in RussianPechnikova E.V., Kirpichnikov M.P., Sokolova O.S. Radiation damage in cryoelectronic microscopy: is it always harmful? Priroda, 2015, v. 3, p. 25-29. Full-text PDF
  10. Petrova T., Slutskaya E., Boyko K., Sokolova O., Rakitina T., Korzhenevskiy D., Gorbacheva M., Bezsudnova E., Popov V. The localization of Trp residues on the surface of the dodecamer of the aminopeptidase APDkam598 from the archaeon Desulfurococcus kamchatkensis. Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 2015, v. 71(3), p. 277-285. Full-text PDF
  11. Stanishneva-Konovalova T.B., Sokolova O.S. Molecular dynamics simulations of negatively charged DPPC/DPPI lipid bilayers at two levels of resolution. Computational and Theoretical Chemistry, 2015, v. 1058, p. 61-66. Full-text PDF

2014

  1. Grizel A.V., Gluhov G.S., Sokolova O.S. Mechanisms of Activation of Voltage-Gated Potassium Channels. Acta Naturae, 2014, v. 6(4), p. 56-72. Full-text PDF English Full-text PDFRussian
  2. Grizel A., Popinako A., Kasimova M.A., Stevens L., Karlova M., Moisenovich M.M., Sokolova O.S. Domain Structure and Conformational Changes in rat KV2.1 ion Channel. Journal of Neuroimmune Pharmacology, 2014, v. 9(5), p. 727-39. Full-text PDF
  3. Jansen S., Collins A., Golden L., Sokolova O., Goode B.L. Structure and mechanism of mouse cyclase-associated protein (CAP1) in regulating actin dynamics. Journal of Biological Chemistry, 2014, v. 289(44), p. 30732-42. Full-text PDF
  4. Sokolova O.S., Shaburova O.V., Pechnikova E.V., Shaytan A.K., Krylov S.V., Kiselev N.A., Krylov V.N. Genome packaging in EL and Lin68, two giant phiKZ-like bacteriophages of P. aeruginosa. Virology, 2014, v. 470, p. 472-478. Full-text PDF
  5. Zagidullin V.E., Lukashev E.P., Knox P.P., Seifullina N.Kh., Sokolova O.S., Pechnikova E.V., Lokstein H., Paschenko V.Z. Properties of Hybrid Complexes Composed of Photosynthetic Reaction Centers from the Purple Bacterium Rhodobacter sphaeroides and Quantum Dots in Lecithin Liposomes. Biochemistry, 2014, v. 79(11), p. 1452-1463. Full-text PDF

2013

  1. Becalska A.N., Kelley C.F., Berciu C., Stanishneva-Konovalova T.B., Fu X., Wang S., Sokolova O.S., Nicastro D., Rodal A.A. Formation of membrane ridges and scallops by the F-BAR protein Nervous Wreck. Molecular Biology of the Cell, 2013, v. 24(15), p. 2406-2418. Full-text PDF
  2. Chaudhry F., Breitsprecher D., Little K., Sharov G., Sokolova O., Goode B.L. Srv2/cyclase-associated protein forms hexameric shurikens that directly catalyze actin filament severing by cofilin. Molecular Biology of the Cell, 2013, v. 24(1), p. 31-41. Full-text PDF
  3. Efremov Yu M., Dokrunova A.A., Bagrov D.V., Kudryashova K.S., Sokolova O.S., Shaitan K.V. The effects of confluency on cell mechanical properties. Journal of Biomechanics, 2013, v. 46, p. 1081-1087. Full-text PDF
  4. Paley E.L., Perry G., Sokolova O. Tryptamine Induces Axonopathy and Mitochondriopathy Mimicking Neurodegenerative Diseases via Tryptophanyl-tRNA Deficiency. Current Alzheimer Research, 2014, v. 10(9), p. 987-1004.
  5. Pechnikova E., Stanishneva-Konovalova T.B., Volokh O., Sokolova O. Increase of Contrast for Studies of Bionanoparticles. Nano industry, 2013, v. 5(43), p. 18-25. Full-text PDF
  6. Shaitan K.V., Sokolova O.S., Kasimova M.A., Novoseletskii V.N., Kirpichnikov M.P. Influence of Interionic Interactions on Functional State and Blocker Binding of Voltage-Gated Potassium Channels. Moscow University Biological Sciences Bulletin, 2013, v. 68(1), p. 8-14. Full-text PDF
  7. Ydenberg C.A., Padrick S.B., Sweeney M.O., Gandhi M., Sokolova O., Goode B.L. GMF Severs Actin-Arp2/3 Complex Branch Junctions by a Cofilin-like Mechanism. Current Biology, 2013, v. 23(12), p. 1037-1045. Full-text PDF

2012

  1. Only in Russian Dokrunova A.A., Sokolova O.S. The content of a1-antitrypsin in serum during prostate diseases. Urology, 2012, v. 5, p. 77-80.
  2. Maiti S., Michelot A., Gould C., Blanchoin L., Sokolova O., Goode B.L. Structure and activity of full-length formin mDia1. Cytoskeleton, 2012, v. 69(6), p. 393–405. [abs]Full-text PDF
  3. Moisenovich M.M., Pustovalova O., Shackelford J., Vasiljeva T.V., Druzhinina T.V., Kamenchuk Y.A., Guzeev V.V., Sokolova O.S., Bogush V.G., Debabov V.G., Kirpichnikov M.P., Agapov I.I. Tissue regeneration in vivowithin recombinant spidroin1 scaffolds. J. Biomaterials, 2012, v. 33, p. 3887-3898. Full-text PDF
  4. Only in Russian Popinako A.V., Sokolova O.S. How to predict unknown protein structure. Priroda, 2012, v. 7, p. 33-38. Full-text PDF
  5. Only in Russian Shaytan K.V., Sokolova O.S., Shaytan A.K., Kasimova M.A., Novoseleckiy V.N., Kirpichnikov M.P. The impact of interionic interactions on the voltage-dependent potassium channel during normal function and blockators linkage. Moscow University press, Section Biology. 2012, v.4, p.17-23. Full-text PDF
  6. Only in Russian Sokolova O.S. Nanoparticles of titanium dioxide in various crystalline forms in the composition of sunscreens. Toxicological bulletin, 2012, v. 3, p. 38-42.
  7. Sokolova O.S., Shaitan K.V., Grizel A.V., Popinako A.V., Karlova M.G., Kirpichnikov M.P. Three-Dimensional Structure of Human Voltage-Gated Ion Channel Kv10.2 Studied by Electron Microscopy of Macromolecules and Molecular Modeling. Russian Journal of Bioorganic Chemistry, 2012, v. 38(2), p. 152–158. Full-text PDF
  8. Sokolova O., Ulasova N., Efremov Y., Dokrunova A., Vorontsova O., Bagrov D. Inactivation of Formin Affects Elastic Properties of Eucaryotic Cells. Microscopy and Microanalysis, 2012, v. 18(S2), p. 164-165.
  9. Sokolova O., Volokh O., Hsieh F., Studitsky V., Pechnikova E. 3D Structure of Intermediate Complexes Formed During Transcription Through Nucleosome by RNA Polymerase. Microscopy and Microanalysis, 2012, v. 18(S2), p. 120-121.
  10. Only in Russian Sokolova O.S., Volokh O.I., Stanishneva-Konovalova T.B., Pechnikova E.V. Transmission electron microscopy for studying macromolecular structure. Integral. Interdisciplinary journal, 2012, v. 5, p. 22-25.

2011

  1. Agapov I.I., Moisenovich M.M., Druzhinina T.V., Kamenchuk Y.A., Trofimov K.V., Vasilyeva T.V., Konkov A.S., Arhipova A.Y., Sokolova O.S., Guzeev V.V., Kirpichnikov M.P. Biocomposite scaffolds containing regenerated silkfibroin and nanohydroxyapatite for bone tissue regeneration. Dokl Biochem Biophys., 2011, v. 440, p. 228-230. Full-text PDF
  2. Danilevich V.N., Vasilenko E.A., Pechnikova E.V., Sokolova O.S., and Grishin E.V. Micro- and Nanoparticles of Condensed DNA Formed in PCR with Taq Polymerase and Plasmid DNA as a Template. Microbiology, 2011, v. 80(3), p. 420-431. [abs]Full-text PDF
  3. Karlova M.G., Pischalnikova A.V., Ramonova A.A., Moisenovich M.M., Sokolova O.S., Shaytan K.V. In Vitro Fluorescence Assay to Study the Folding of Kv Ion Channels. Biophysics, 2011, v. 56, p. 243-249. Full-text PDF
  4. Levtsova O.V., Antonov M.Y., Naumenkova T.V., Sokolova O.S. Interaction of zervamicin IIB with lipid bilayers. Molecular dynamics study. Comput Biol Chem., 2011, v. 35(1), p. 34-39. [abs]Full-text PDF
  5. Levtsova O.V., Davletov I.D., Sokolova O.S., Shaytan K.V. Molecular dynamics for the interactions of I-BAR domain of IRSp53 protein with negatively charged membranes. Biophysics, 2011, v. 56, p. 220-224. Full-text PDF
  6. Moisenovich M.M., Pustovalova O.L., Arhipova A.Yu., Vasiljeva T.V., Sokolova O.S., Bogush V.G., Debabov V.G., Sevastianov V.I., Kirpichnikov M.P., Agapov I.I. In vitro and in vivo biocompatibility studies of a recombinant analogue of spidroin 1 scaffolds. J Biomed Mater Res A., 2011, v. 96(1), p. 125-131. Full-text PDF
  7. Pleteneva E.A., Burkalceva M.V., Shaburova O.V., Krilov S.V., Pechnikova E.V., Sokolova O.S., Krilov V.N. TL, the new bacteriophage of Pseudomonas aeruginosa and its application for the search of halo-producing bacteriophages. Genetika, 2011, v. 47(1), p. 1-5. [abs]Full-text PDF
  8. Only in Russian Sokolova O.S., Sharov G.G., Ulasova N.Yu., Pechnikova E.V., Davletov I.D., Dokrunova A.A. Architecture of actin binding proteins and their polymorphism in oncogenesis. "Postgenomic researches and technologies", 2011, p. 464-491.
  9. Only in Russian Ulasova N.Yu., Rubachev P.G., Albegova J.K., Hasigov P.Z., Sokolova O.S. Isolation of actin-binding proteins from human prostate tissue gomogenates. Russian Journal of molecular medicine, 2011, No. 5, p. 46-50.

2010

  1. Only in Russian Agapov I.I., Moisenovich M.M., Vasileva T.V., Pustovalova O.L., Konkov A.S., Archipova A.Yu., Sokolova O.S., Bogush V.G., Sevostyanov V.I., Debabov V.G., Kirpichnikov M.P. Biodegradable matrix of regenerated silk Bombix mori. Reports of the Academy of Sciences, 2010, v. 433(5), p. 1-4. Full-text PDF
  2. Only in Russian Dokrunova A.A., Ulasova N.Yu., Kramina T.E., Albickiy I.A., Hasigov P.Z., Sokolova O.S. Polymorphism of alfa1-antitrypsin in cancer and prostatic hyperplasia. Russian Journal of molecular medicine, 2010, v. 6, p. 43-49.
  3. Shishkin S.S., Kovalev L.I., Kovaleva M.A., Krahmaleva I.N., Lisitskaya K.V., Eremina L.S., Ivanov A.V., Gerasimov E.V., Sadihov E.G., Ulasova N.Yu., Sokolova O.S., Toropigin I.Yu., Popov V.O. "Prostate cancer proteomics" database. Acta Naturae, 2010, v. 2(4), p. 95-104. Full-text PDF
  4. Only in Russian O.S.Sokolova. How to see «nano»? Priroda, 2010, v. 9, p. 38-43. Full-text PDF
  5. Sokolova O.S., Bogush V.G., Davydova L.I., Polevova S.V., Antonov S.A., Neretina T.V., Klinov D.V., Debabov V.G., Kirpichnikov M.P. The formation of a quaternary structure by recombinant analogs of spider silk proteins. Mol Biology, 2010, v. 44(1), p. 150-157. [abs]Full-text PDF
  6. Sokolova O., Filchikov M., Pechnikova E., Miroshnikov K. Structure and Virulence of Pseudomonas Aeruginosa Bacteriophages. Microsc. Microanal., 2010, v. 16 (Suppl 2). Full-text PDF

2009

  1. Agapov I.I., Pustovalova O.L., Moisenovich M.M., Bogush V.G., Sokolova O.S., Sevastyanov V.I., Debabov V.G., Gotye S.V., Kirpichnikov M.P. Recombinant silk scaffold for tissue engineering. Rare metals, 2009, v. 28, p. 84-87.
  2. Agapov I.I., Pustovalova O.L., Moisenovich M.M., Bogush V.G., Sokolova O.S., Sevastyanov V.I., Debabov V.G., Gotye S.V., Kirpichnikov M.P. Three-Dimensional Scaffold Made from Recombinant Spider Silk Protein for Tissue Engineering. Doklady Biochemistry and Biophysics, 2009, v. 426(1), p. 127-130. [abs]Full-text PDF
  3. Bogush V.G., Sokolova O.S., Davydova L.I., Klinov D.V., Sidoruk K.V., Esipova N.G., Neretina T.V., Orchanskyi I.A., Makeev V.Yu., Tumanyan V.G., Shaytan K.V., Debabov V.G., Kirpichnikov M.P. A novel model system for design of biomaterials based on recombinant analogs of spider silk proteins. J Neuroimmune Pharmacol., 2009, v. 4(1), p. 17-27. [abs]Full-text PDF
  4. Pischalnikova A.V. and Sokolova O.S. The domain and conformational organization in potassium voltage-gated ion channels. Journal of Neuroimmune Pharmacology, 2009, v. 4(1), p. 71-82. [abs]Full-text PDF
  5. Only in Russian Pustovalova O.L., Moisenovich M.M., Eremin P.S., Archipova A.Yu., Ramonova A.A., Sokolova O.S., Bogush V.G., Agapov I.I., Kirpichnikov M.P. Cultivating cells on three-dimensional matrix of a recombinant spidroin. Russian immunological journal, 2009, v. 3(12), part. 2, p. 139-146.

2008

  1. Sinitsyna N., Orshansky I., Sokolova O. Actin-binding proteins – how to reval the conformational changes. Journal of Bioinformatics and Computational Biology, 2008, v. 6(4), p. 869–884. [abs]Full-text [PDF]

Before 2008

  1. Paley E.L., Denisova G., Sokolova O., Posternak N., Wang X., and Brownell A.-L. Tryptamine Induces Tryptophanyl-tRNA Synthetase-Mediated Neurodegeneration With Neurofibrillary Tangles in Human Cell and Mouse Models. Neuro Molecular Medicine, 2007, v. 9, p. 55-82. [abs]Full-text [PDF]
  2. Paley E.L., Smelyanski L., Malinovskii V., Subbarayan P.R., Berdichevsky Y., Posternak N., Gershoni J.M., Sokolova O., Denisova G. Mapping and molecular characterization of novel monoclonal antibodies to conformational epitopes on NH2 and COOH termini of mammalian Tryptophanyl-tRNA Synthetase reveal link of the epitopes to aggregation and Alzheimer's disease. Mol Immunol., 2007, v. 44(4), p. 541-557. [abs]Full-text [PDF]
  3. Rodal A.A., Sokolova O., Robins D., Hippenmeyer S., Riezman H., Grigorieff N., Goode B.L. Conformational changes in the Arp2/3 complex leading to actin nucleation. Nat. Struct. Mol. Biol., 2005, v. 12(1), p. 26-31. [abs]Full-text [PDF]
  4. Sokolova O. Structure of cation channels, revealed by single particle electron microscopy. FEBS Lett., 2004, v. 564(3), p. 251-256. [abs]Full-text [PDF]
  5. Sokolova O., Accardi A., Gutierrez D., Lau A., Rigney M., Grigorieff N. Conformational changes in the C terminus of Shaker K+ channel bound to the rat Kvbeta2-subunit. Proc. Natl. Acad. Sci. U.S.A., 2003, v. 100(22), p. 12607-12612. [abs]Full-text [PDF]
  6. Sokolova O., Kolmakova-Partensky L., Grigorieff N. Three-dimensional structure of a voltage-gated potassium channel at 2.5 nm resolution. Structure, 2001, v. 9, p. 215-220. [abs]Full-text [PDF]
  7. Sokolova O.S. Immunochemical methods in aeropalinology. Aerosols, 1996, v. 2(2), p. 21-24.
  8. Only in Russian E.V.Titov, O.S.Sokolova and A.D.Volodarsky. Distribution of lectins throughout Grape stem tissues. Russian journal of plant physiology, 1992, v. 39(1), part. 1, p. 23-28.
  9. Only in Russian Volodarskiy A.D., Sumaroka A.D., Sokolova O.S., Evseeva N.V., Schegolev S.Yu. The study of the molecular and cellular bases of the synthesis of the proliferative antigen of the initial division and cell differentiation in plants. Information Bulletin of the RFBR, 1998, v. 6(4), p. 417-417.